CIMMYT Research Data & Software Repository Network

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CIMMYT institutional network of scientific datasets and software repositories.

Cereal Systems Initiative for South Asia (CSISA) Research Data

CIMMYT Research Data

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International Wheat Yield Partnership Research Data

Sustainable and Resilient Farming Systems Intensification in the Eastern Gangetic Plains (SRFSI) Research Data

Crops to End Hunger (CtEH) Data

CIMMYT Seeds of Discovery

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7,161 to 7,170 of 13,425 Results

Replication Data for: Genetic Dissection of Resistance to Gray Leaf Spot by Combining Genome-Wide Association, Linkage Mapping and Genomic Prediction in Tropical Maize Germplasm Oct 18, 2020 - CIMMYT Research Data Kibe, Maguta; Nair, Sudha; Das, Biswanath; Jumbo, MacDonald Bright; Makumbi, Dan; Kinyua, Johnson; Suresh, L.M.; Beyene, Yoseph; Olsen, Michael; Prasanna, B.M.; Gowda, Manje, 2020, "Replication Data for: Genetic Dissection of Resistance to Gray Leaf Spot by Combining Genome-Wide Association, Linkage Mapping and Genomic Prediction in Tropical Maize Germplasm", https://hdl.handle.net/11529/10548467, CIMMYT Research Data & Software Repository Network, V1 Gray leaf spot (GLS) is a major maize foliar disease in sub-Saharan Africa that can substantially reduce yields for farmers. This dataset contains supporting phenotypic and genotypic data used in the analysis of the genetic architecture of GLS resistance in maize. The data in thi...
GBS_SNPs_3_DH_pops_combined.hmp.txt.gz Oct 18, 2020 - Replication Data for: Genetic Dissection of Resistance to Gray Leaf Spot by Combining Genome-Wide Association, Linkage Mapping and Genomic Prediction in Tropical Maize Germplasm Gzip Archive - 63.4 MB - MD5: f99e30e6e9fa8e2047aa421228a6e7c6
Phenotypic_data_IMAS_DHpops.xlsx.gz Oct 18, 2020 - Replication Data for: Genetic Dissection of Resistance to Gray Leaf Spot by Combining Genome-Wide Association, Linkage Mapping and Genomic Prediction in Tropical Maize Germplasm Gzip Archive - 26.8 MB - MD5: d9906ce41371e45638bf0df3497c647e Phenotypic data and genotypic related to IMAS materials, Doubled Haploid Populations and F3 populations
V2.7 Build_IMAS 424 Samples.hmp.txt.gz Oct 18, 2020 - Replication Data for: Genetic Dissection of Resistance to Gray Leaf Spot by Combining Genome-Wide Association, Linkage Mapping and Genomic Prediction in Tropical Maize Germplasm Gzip Archive - 76.3 MB - MD5: 6a290828a3545fdaf29eeef3876a98fd IMAS genotypic data
Genomic and pedigree prediction with genotype × environment interaction in spring wheat grown in South and Western Asia, North Africa, and Mexico Oct 16, 2020 - CIMMYT Research Data Sukumaran, Sivakumar; Crossa, Jose; Jarquín, Diego; Lopes, Marta; Reynolds, Matthew P., 2016, "Genomic and pedigree prediction with genotype × environment interaction in spring wheat grown in South and Western Asia, North Africa, and Mexico", https://hdl.handle.net/11529/10714, CIMMYT Research Data & Software Repository Network, V3 Increases in genetic gains in grain yield can be accelerated through genomic selection (GS). In the present study seven genomic prediction models under two cross validation scenarios were evaluated on the Wheat Association Mapping Initiative population of 287 advanced elite lines...
WAMI PHENOTYPIC AND MARKER DATA.zip.gz Oct 16, 2020 - Genomic and pedigree prediction with genotype × environment interaction in spring wheat grown in South and Western Asia, North Africa, and Mexico Gzip Archive - 3.8 MB - MD5: 58ed72fb2f0cc5ee413a04bee137d0e4
RINDSEL-Manual-LSI-14Oct2020.pdf Oct 14, 2020 - RIndSel Selection indeces for plant breeding Adobe PDF - 1.4 MB - MD5: 606a21265ae03839be9141a3854ef371 A manual based on the book "Linear Selection Indices in Modern Plant Breeding" https://www.springer.com/gp/book/9783319912226
ViTSel - Data visualization for selection Oct 14, 2020 - CIMMYT Research Software Dieng, Ibnou; Rodríguez, Francisco; Alvarado, Gregorio; Pacheco-Gil, Rosa Ángela; Burgueño, Juan, 2020, "ViTSel - Data visualization for selection", https://hdl.handle.net/11529/10548519, CIMMYT Research Data & Software Repository Network, V2 ViTSel is and R based software to visualize results of multi-environmental multi-trait analysis for selection in plant breeding. Given a matrix of genotype by environments in rows and traits in columns it produces several descriptive statistics and figures to explore results. It...
ViTSel_setup-14-10-2020.zip.gz Oct 14, 2020 - ViTSel - Data visualization for selection Gzip Archive - 272.9 MB - MD5: 3b7dfe0181de3fc19fc4e505abb34517
Additive genetic variance and covariance between relatives in wheat crosses with variable parental ploidy levels Oct 3, 2020 - CIMMYT Research Data Puhl, Laura E; Crossa, Jose; Sebastian, Munilla; Pérez-Rodríguez, Paulino; Cantet, R. J. C., 2020, "Additive genetic variance and covariance between relatives in wheat crosses with variable parental ploidy levels", https://hdl.handle.net/11529/10548407, CIMMYT Research Data & Software Repository Network, V3 Synthetic hexaploid wheat was developed and used in breeding to introduce new genetic diversity into bread wheat, through interspecific hybridization of T. tauschii (diploid) and durum wheat T. turgidum (tetraploid) to produce synthetic derivatives. Therefore, one may infer that...

Replication Data for: Genetic Dissection of Resistance to Gray Leaf Spot by Combining Genome-Wide Association, Linkage Mapping and Genomic Prediction in Tropical Maize Germplasm

Oct 18, 2020 - CIMMYT Research Data

Kibe, Maguta; Nair, Sudha; Das, Biswanath; Jumbo, MacDonald Bright; Makumbi, Dan; Kinyua, Johnson; Suresh, L.M.; Beyene, Yoseph; Olsen, Michael; Prasanna, B.M.; Gowda, Manje, 2020, "Replication Data for: Genetic Dissection of Resistance to Gray Leaf Spot by Combining Genome-Wide Association, Linkage Mapping and Genomic Prediction in Tropical Maize Germplasm", https://hdl.handle.net/11529/10548467, CIMMYT Research Data & Software Repository Network, V1

Gray leaf spot (GLS) is a major maize foliar disease in sub-Saharan Africa that can substantially reduce yields for farmers. This dataset contains supporting phenotypic and genotypic data used in the analysis of the genetic architecture of GLS resistance in maize. The data in thi...

GBS_SNPs_3_DH_pops_combined.hmp.txt.gz

Oct 18, 2020 - Replication Data for: Genetic Dissection of Resistance to Gray Leaf Spot by Combining Genome-Wide Association, Linkage Mapping and Genomic Prediction in Tropical Maize Germplasm

Gzip Archive - 63.4 MB -

Phenotypic_data_IMAS_DHpops.xlsx.gz

Oct 18, 2020 - Replication Data for: Genetic Dissection of Resistance to Gray Leaf Spot by Combining Genome-Wide Association, Linkage Mapping and Genomic Prediction in Tropical Maize Germplasm

Gzip Archive - 26.8 MB -

Phenotypic data and genotypic related to IMAS materials, Doubled Haploid Populations and F3 populations

V2.7 Build_IMAS 424 Samples.hmp.txt.gz

Oct 18, 2020 - Replication Data for: Genetic Dissection of Resistance to Gray Leaf Spot by Combining Genome-Wide Association, Linkage Mapping and Genomic Prediction in Tropical Maize Germplasm

Gzip Archive - 76.3 MB -

IMAS genotypic data

Genomic and pedigree prediction with genotype × environment interaction in spring wheat grown in South and Western Asia, North Africa, and Mexico

Oct 16, 2020 - CIMMYT Research Data

Sukumaran, Sivakumar; Crossa, Jose; Jarquín, Diego; Lopes, Marta; Reynolds, Matthew P., 2016, "Genomic and pedigree prediction with genotype × environment interaction in spring wheat grown in South and Western Asia, North Africa, and Mexico", https://hdl.handle.net/11529/10714, CIMMYT Research Data & Software Repository Network, V3

Increases in genetic gains in grain yield can be accelerated through genomic selection (GS). In the present study seven genomic prediction models under two cross validation scenarios were evaluated on the Wheat Association Mapping Initiative population of 287 advanced elite lines...

WAMI PHENOTYPIC AND MARKER DATA.zip.gz

Oct 16, 2020 - Genomic and pedigree prediction with genotype × environment interaction in spring wheat grown in South and Western Asia, North Africa, and Mexico

Gzip Archive - 3.8 MB -

RINDSEL-Manual-LSI-14Oct2020.pdf

Oct 14, 2020 - RIndSel Selection indeces for plant breeding

Adobe PDF - 1.4 MB -

A manual based on the book "Linear Selection Indices in Modern Plant Breeding" https://www.springer.com/gp/book/9783319912226

ViTSel - Data visualization for selection

Oct 14, 2020 - CIMMYT Research Software

Dieng, Ibnou; Rodríguez, Francisco; Alvarado, Gregorio; Pacheco-Gil, Rosa Ángela; Burgueño, Juan, 2020, "ViTSel - Data visualization for selection", https://hdl.handle.net/11529/10548519, CIMMYT Research Data & Software Repository Network, V2

ViTSel is and R based software to visualize results of multi-environmental multi-trait analysis for selection in plant breeding. Given a matrix of genotype by environments in rows and traits in columns it produces several descriptive statistics and figures to explore results. It...

ViTSel_setup-14-10-2020.zip.gz

Oct 14, 2020 - ViTSel - Data visualization for selection

Gzip Archive - 272.9 MB -

Additive genetic variance and covariance between relatives in wheat crosses with variable parental ploidy levels

Oct 3, 2020 - CIMMYT Research Data

Puhl, Laura E; Crossa, Jose; Sebastian, Munilla; Pérez-Rodríguez, Paulino; Cantet, R. J. C., 2020, "Additive genetic variance and covariance between relatives in wheat crosses with variable parental ploidy levels", https://hdl.handle.net/11529/10548407, CIMMYT Research Data & Software Repository Network, V3

Synthetic hexaploid wheat was developed and used in breeding to introduce new genetic diversity into bread wheat, through interspecific hybridization of T. tauschii (diploid) and durum wheat T. turgidum (tetraploid) to produce synthetic derivatives. Therefore, one may infer that...

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