CIMMYT Research Data & Software Repository Network

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CIMMYT institutional network of scientific datasets and software repositories.

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1 to 10 of 401 Results

Dataset / Software New deep learning genomic prediction model for multi-traits with mixed binary, ordinal, and continuous phenotypes Oct 22, 2018 - CIMMYT Research Data Montesinos-López, Osval A ; Martín-Vallejo, Javier; Crossa, Jose; Gianola, Daniel ; Hernández-Suárez, Carlos M.; Montesinos-López, Abelardo; Juliana, Philomin; Singh, Ravi, 2018, "New deep learning genomic prediction model for multi-traits with mixed binary, ordinal, and continuous phenotypes", hdl:11529/10548140, CIMMYT Research Data & Software Repository Network, V1 The seven data sets are wheat data from CIMMYT Global Wheat Breeding program. They comprise different traits, like days to heading, days to maturity, grain yield, grain color, different type of leaf and stripe rust in wheat. Also the trials were run in different environments.
Dataset / Software Evaluating Radar Satellite Based Remote Sensing for Conservation Agriculture Adoption Detection in North and Central Mexico Oct 8, 2018 - CIMMYT Research Data Sonder, Kai; Schulthess, Urs; Chomé, Guillaume, 2018, "Evaluating Radar Satellite Based Remote Sensing for Conservation Agriculture Adoption Detection in North and Central Mexico", hdl:11529/10548137, CIMMYT Research Data & Software Repository Network, V1 Conservation agriculture has been tested and out scaled for over 60 years in rural areas of Mexico, however the rate of adoption and dis adoption, as well as the current area under CA is unknown. Estimates range between 50,000 ha and over 800,000 ha depending on the source. Studi...
Dataset / Software Supplemental Materials for The Relative Efficiency of Three Constrained Multistage Linear Phenotypic Selection Indices Oct 8, 2018 - CIMMYT Research Data Cerón-Rojas, J.Jesús; Toledo, Fernando; Crossa, Jose, 2018, "Supplemental Materials for The Relative Efficiency of Three Constrained Multistage Linear Phenotypic Selection Indices", hdl:11529/10548136, CIMMYT Research Data & Software Repository Network, V1 This dataset provides supplemental information related to an investigation of constrained multistage linear phenotypic selection indices.
Dataset / Software IWYP64 - HiBAP 35k Wheat Breeders Array Genotyping Oct 4, 2018 - International Wheat Yield Partnership Research Data Hall, Anthony, 2018, "IWYP64 - HiBAP 35k Wheat Breeders Array Genotyping", hdl:11529/10548112, CIMMYT Research Data & Software Repository Network, V1 Genotyping of HiBAP using 35K Wheat breeders array, containing 9267 markers.
Dataset / Software Populations Axiom SNPs Data - John Innes Centre Oct 4, 2018 - International Wheat Yield Partnership Research Data Griffiths, Simon; Wingen, Luzie; Edwards, Keith, 2017, "Populations Axiom SNPs Data - John Innes Centre", hdl:11529/10996, CIMMYT Research Data & Software Repository Network, V6 The Breeders' 35K Axiom® array results for the following populations: ParagonxBaj, ParagonxBKACHU, ParagonxCIMCOG47, ParagonxCIMCOG49, ParagonxCIMCOGSynthetic, ParagonxMISR1, ParagonxPFAU, ParagonxSUP152, ParagonxWaxwing, ParagonxWYAL, WeebilxCIMCOG03, WeebilxCIMCOG26, WeebilxCIM...
Dataset / Software Green house and field evaluation of transgenic wheat overexpressing AVP1, NAS2 and PSTOL1 genes for higher grain yield Oct 3, 2018 - International Wheat Yield Partnership Research Data Roy, Stuart , 2018, "Green house and field evaluation of transgenic wheat overexpressing AVP1, NAS2 and PSTOL1 genes for higher grain yield", hdl:11529/10548078, CIMMYT Research Data & Software Repository Network, V2 Phenotypic and climate/environment data collected for IWYP39 field and glasshouse trials conducted in 2017 by the Unversity of Adelaide, South Australia. Rainfall data for the field trial was collected at Glenthorne Farm, O'Halloran Hill, South Australia and reported by Martin Ca...
Dataset / Software Determination of allelic variation in TaVP and TaPSTOL1 genes in 135 bread wheat and 22 durum wheat lines Oct 3, 2018 - International Wheat Yield Partnership Research Data Roy, Stuart , 2018, "Determination of allelic variation in TaVP and TaPSTOL1 genes in 135 bread wheat and 22 durum wheat lines", hdl:11529/10548064, CIMMYT Research Data & Software Repository Network, V1, UNF:6:hOqYG9yfF7vAUid6wsUhUA== Sequence capture data from the project IWYP39 investigating allelic variation in TaVP and TaPSTOL1 genes in 135 bread wheat and 22 durum wheat lines. Datasets also describe the sequence of the genes for different members of the gene families in bread and durum wheat.
Dataset / Software Discovery of variants in the parental lines grown in the hybrid crossing block using genotyping-by-sequencing Oct 3, 2018 - International Wheat Yield Partnership Research Data Baenziger, Stephen; Belamkar, Vikas, 2018, "Discovery of variants in the parental lines grown in the hybrid crossing block using genotyping-by-sequencing", hdl:11529/10548065, CIMMYT Research Data & Software Repository Network, V1 Genotyping-by-sequencing (GBS) data, variant calls and Single Nucleotide Polymorphism (SNP) calls of parental lines grown in the hybrid crossing block in 2017.
Dataset / Software CIMMYT Maize Lines (CMLs) - Pedigree and Characterization Data Oct 1, 2018 - CIMMYT Research Data CIMMYT Global Maize Program, 2015, "CIMMYT Maize Lines (CMLs) - Pedigree and Characterization Data", hdl:11529/10246, CIMMYT Research Data & Software Repository Network, V7 CIMMYT has periodically announced CIMMYT Maize Lines (CMLs). CMLs are carefully selected inbred lines with good general combining ability and a significant number of value-adding traits such as drought tolerance, N use efficiency, acid soil tolerance, resistance to diseases, inse...
Dataset / Software Supplemental Data for Multi-trait, Multi-environment Deep Learning Modeling for Genomic-Enabled Prediction of Plant Traits Sep 28, 2018 - CIMMYT Research Data Montesinos-López, Osval A ; Montesinos-López, Abelardo; Crossa, Jose; Gianola, Daniel ; Hernández-Suárez, Carlos M.; Martín-Vallejo, Javier, 2018, "Supplemental Data for Multi-trait, Multi-environment Deep Learning Modeling for Genomic-Enabled Prediction of Plant Traits", hdl:11529/10548134, CIMMYT Research Data & Software Repository Network, V1 This study provides supplemental data to support an investigation of the power of multi-trait deep learning (MTDL) models in terms of genomic-enabled prediction accuracy.

Dataset / Software

New deep learning genomic prediction model for multi-traits with mixed binary, ordinal, and continuous phenotypes

Oct 22, 2018 - CIMMYT Research Data

Montesinos-López, Osval A ; Martín-Vallejo, Javier; Crossa, Jose; Gianola, Daniel ; Hernández-Suárez, Carlos M.; Montesinos-López, Abelardo; Juliana, Philomin; Singh, Ravi, 2018, "New deep learning genomic prediction model for multi-traits with mixed binary, ordinal, and continuous phenotypes", hdl:11529/10548140, CIMMYT Research Data & Software Repository Network, V1

The seven data sets are wheat data from CIMMYT Global Wheat Breeding program. They comprise different traits, like days to heading, days to maturity, grain yield, grain color, different type of leaf and stripe rust in wheat. Also the trials were run in different environments.

Dataset / Software

Evaluating Radar Satellite Based Remote Sensing for Conservation Agriculture Adoption Detection in North and Central Mexico

Oct 8, 2018 - CIMMYT Research Data

Sonder, Kai; Schulthess, Urs; Chomé, Guillaume, 2018, "Evaluating Radar Satellite Based Remote Sensing for Conservation Agriculture Adoption Detection in North and Central Mexico", hdl:11529/10548137, CIMMYT Research Data & Software Repository Network, V1

Conservation agriculture has been tested and out scaled for over 60 years in rural areas of Mexico, however the rate of adoption and dis adoption, as well as the current area under CA is unknown. Estimates range between 50,000 ha and over 800,000 ha depending on the source. Studi...

Dataset / Software

Supplemental Materials for The Relative Efficiency of Three Constrained Multistage Linear Phenotypic Selection Indices

Oct 8, 2018 - CIMMYT Research Data

Cerón-Rojas, J.Jesús; Toledo, Fernando; Crossa, Jose, 2018, "Supplemental Materials for The Relative Efficiency of Three Constrained Multistage Linear Phenotypic Selection Indices", hdl:11529/10548136, CIMMYT Research Data & Software Repository Network, V1

This dataset provides supplemental information related to an investigation of constrained multistage linear phenotypic selection indices.

Dataset / Software

IWYP64 - HiBAP 35k Wheat Breeders Array Genotyping

Oct 4, 2018 - International Wheat Yield Partnership Research Data

Hall, Anthony, 2018, "IWYP64 - HiBAP 35k Wheat Breeders Array Genotyping", hdl:11529/10548112, CIMMYT Research Data & Software Repository Network, V1

Genotyping of HiBAP using 35K Wheat breeders array, containing 9267 markers.

Dataset / Software

Populations Axiom SNPs Data - John Innes Centre

Oct 4, 2018 - International Wheat Yield Partnership Research Data

Griffiths, Simon; Wingen, Luzie; Edwards, Keith, 2017, "Populations Axiom SNPs Data - John Innes Centre", hdl:11529/10996, CIMMYT Research Data & Software Repository Network, V6

The Breeders' 35K Axiom® array results for the following populations: ParagonxBaj, ParagonxBKACHU, ParagonxCIMCOG47, ParagonxCIMCOG49, ParagonxCIMCOGSynthetic, ParagonxMISR1, ParagonxPFAU, ParagonxSUP152, ParagonxWaxwing, ParagonxWYAL, WeebilxCIMCOG03, WeebilxCIMCOG26, WeebilxCIM...

Dataset / Software

Green house and field evaluation of transgenic wheat overexpressing AVP1, NAS2 and PSTOL1 genes for higher grain yield

Oct 3, 2018 - International Wheat Yield Partnership Research Data

Roy, Stuart , 2018, "Green house and field evaluation of transgenic wheat overexpressing AVP1, NAS2 and PSTOL1 genes for higher grain yield", hdl:11529/10548078, CIMMYT Research Data & Software Repository Network, V2

Phenotypic and climate/environment data collected for IWYP39 field and glasshouse trials conducted in 2017 by the Unversity of Adelaide, South Australia. Rainfall data for the field trial was collected at Glenthorne Farm, O'Halloran Hill, South Australia and reported by Martin Ca...

Dataset / Software

Determination of allelic variation in TaVP and TaPSTOL1 genes in 135 bread wheat and 22 durum wheat lines

Oct 3, 2018 - International Wheat Yield Partnership Research Data

Roy, Stuart , 2018, "Determination of allelic variation in TaVP and TaPSTOL1 genes in 135 bread wheat and 22 durum wheat lines", hdl:11529/10548064, CIMMYT Research Data & Software Repository Network, V1, UNF:6:hOqYG9yfF7vAUid6wsUhUA==

Sequence capture data from the project IWYP39 investigating allelic variation in TaVP and TaPSTOL1 genes in 135 bread wheat and 22 durum wheat lines. Datasets also describe the sequence of the genes for different members of the gene families in bread and durum wheat.

Dataset / Software

Discovery of variants in the parental lines grown in the hybrid crossing block using genotyping-by-sequencing

Oct 3, 2018 - International Wheat Yield Partnership Research Data

Baenziger, Stephen; Belamkar, Vikas, 2018, "Discovery of variants in the parental lines grown in the hybrid crossing block using genotyping-by-sequencing", hdl:11529/10548065, CIMMYT Research Data & Software Repository Network, V1

Genotyping-by-sequencing (GBS) data, variant calls and Single Nucleotide Polymorphism (SNP) calls of parental lines grown in the hybrid crossing block in 2017.

Dataset / Software

CIMMYT Maize Lines (CMLs) - Pedigree and Characterization Data

Oct 1, 2018 - CIMMYT Research Data

CIMMYT Global Maize Program, 2015, "CIMMYT Maize Lines (CMLs) - Pedigree and Characterization Data", hdl:11529/10246, CIMMYT Research Data & Software Repository Network, V7

CIMMYT has periodically announced CIMMYT Maize Lines (CMLs). CMLs are carefully selected inbred lines with good general combining ability and a significant number of value-adding traits such as drought tolerance, N use efficiency, acid soil tolerance, resistance to diseases, inse...

Dataset / Software

Supplemental Data for Multi-trait, Multi-environment Deep Learning Modeling for Genomic-Enabled Prediction of Plant Traits

Sep 28, 2018 - CIMMYT Research Data

Montesinos-López, Osval A ; Montesinos-López, Abelardo; Crossa, Jose; Gianola, Daniel ; Hernández-Suárez, Carlos M.; Martín-Vallejo, Javier, 2018, "Supplemental Data for Multi-trait, Multi-environment Deep Learning Modeling for Genomic-Enabled Prediction of Plant Traits", hdl:11529/10548134, CIMMYT Research Data & Software Repository Network, V1

This study provides supplemental data to support an investigation of the power of multi-trait deep learning (MTDL) models in terms of genomic-enabled prediction accuracy.

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