CIMMYT Research Data & Software Repository Network

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CIMMYT institutional network of scientific datasets and software repositories.

Cereal Systems Initiative for South Asia (CSISA) Research Data

CIMMYT Research Data

CIMMYT Research Software

International Wheat Yield Partnership Research Data

Sustainable and Resilient Farming Systems Intensification in the Eastern Gangetic Plains (SRFSI) Research Data

Crops to End Hunger (CtEH) Data

CIMMYT Seeds of Discovery

BNI-CropSustaiN Research Data and Protocols

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11,311 to 11,320 of 13,424 Results

Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using Beagle v.4 Mar 23, 2017 - CIMMYT Research Data Hearne, Sarah; Chen, Charles; Buckler, Edward; Mitchell, Sharon; Romero Navarro, J. Alberto; Swarts, Kelly; Li, Huihui, 2014, "Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using Beagle v.4", https://hdl.handle.net/11529/10035, CIMMYT Research Data & Software Repository Network, V3 Obtain imputed SNP profiles using Beagle v.4 from genotyping-by-sequencing of the accession parents of the SeeD GWAS testcross panel.
Mapping file - Sample ID to Germplasm ID.xlsx Mar 23, 2017 - Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using Beagle v.4 Unknown - 261.2 KB - MD5: f9a1886915ebbbec2d222f1ec0cd38f4 ID mapping file Links sample ID in genotypic results file to a Germplasm ID and a testcross ID at CIMMYT
Mapping file - Sample ID to Germplasm ID.xlsx Mar 23, 2017 - Unimputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel Unknown - 261.2 KB - MD5: f9a1886915ebbbec2d222f1ec0cd38f4 ID mapping file Links sample ID in genotypic results file to a Germplasm ID and a testcross ID at CIMMYT
Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using FILLIN Mar 23, 2017 - CIMMYT Research Data Hearne, Sarah; Buckler, Edward; Chen, Charles; Mitchell, Sharon; Swarts, Kelly; Li, Huihui; Romero Navarro, J. Alberto, 2014, "Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using FILLIN", https://hdl.handle.net/11529/10036, CIMMYT Research Data & Software Repository Network, V3 Obtain imputed SNP profiles from genotyping-by-sequencing of the accession parents of the SeeD GWAS testcross panel.
Mapping file - Sample ID to Germplasm ID.xlsx Mar 23, 2017 - Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using FILLIN Unknown - 261.2 KB - MD5: f9a1886915ebbbec2d222f1ec0cd38f4 ID mapping file Links sample ID in genotypic results file to a Germplasm ID and a testcross ID at CIMMYT
DATASET1to3.Maize.rdata Mar 9, 2017 - A variational Bayes genomic-enabled prediction model with genotype × environment interaction Unknown - 376.8 KB - MD5: 0b0889757980aefa3f3bae20d3ecc318 Phenotypic Data Maize data
DATASET4to5.Wheat.rdata Mar 9, 2017 - A variational Bayes genomic-enabled prediction model with genotype × environment interaction Unknown - 459.3 KB - MD5: c59905b897fe95f9d600f78cd42b4fba Phenotypic Data Wheat data
DATASET6.Wheat_Yield1.rdata Mar 9, 2017 - A variational Bayes genomic-enabled prediction model with genotype × environment interaction Unknown - 5.2 MB - MD5: 4a3ec390c48988b3203c50904a8b78da Phenotypic Data Wheat yield data
KDSmart: Training Materials and Sample Files Mar 2, 2017 - CIMMYT Research Data Hearne, Sarah; Molnar, Terence; Garay, Carlos; Dreher, Kate; Ayala, Claudio, 2016, "KDSmart: Training Materials and Sample Files", https://hdl.handle.net/11529/10669, CIMMYT Research Data & Software Repository Network, V4 KDSmart is an app that can be used for data collection on any Android-based tablet or smartphone. It has many helpful features for capturing data in field and lab settings. This study contains documents and presentations that describe how KDSmart can be used and includes example...
Metasheet.pdf Feb 28, 2017 - Survey to assess the impact of multi-level factors of change on farm trajectories in Southern Bangladesh Adobe PDF - 103.9 KB - MD5: 1afb9d26eaf3d4b4f7eca241d289f509 Metadata Detailed information on the data collection methodology and variables contained in datasets

Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using Beagle v.4

Mar 23, 2017 - CIMMYT Research Data

Hearne, Sarah; Chen, Charles; Buckler, Edward; Mitchell, Sharon; Romero Navarro, J. Alberto; Swarts, Kelly; Li, Huihui, 2014, "Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using Beagle v.4", https://hdl.handle.net/11529/10035, CIMMYT Research Data & Software Repository Network, V3

Obtain imputed SNP profiles using Beagle v.4 from genotyping-by-sequencing of the accession parents of the SeeD GWAS testcross panel.

Mapping file - Sample ID to Germplasm ID.xlsx

Mar 23, 2017 - Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using Beagle v.4

Unknown - 261.2 KB -

ID mapping file

Links sample ID in genotypic results file to a Germplasm ID and a testcross ID at CIMMYT

Mapping file - Sample ID to Germplasm ID.xlsx

Mar 23, 2017 - Unimputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel

Unknown - 261.2 KB -

ID mapping file

Links sample ID in genotypic results file to a Germplasm ID and a testcross ID at CIMMYT

Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using FILLIN

Mar 23, 2017 - CIMMYT Research Data

Hearne, Sarah; Buckler, Edward; Chen, Charles; Mitchell, Sharon; Swarts, Kelly; Li, Huihui; Romero Navarro, J. Alberto, 2014, "Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using FILLIN", https://hdl.handle.net/11529/10036, CIMMYT Research Data & Software Repository Network, V3

Obtain imputed SNP profiles from genotyping-by-sequencing of the accession parents of the SeeD GWAS testcross panel.

Mapping file - Sample ID to Germplasm ID.xlsx

Mar 23, 2017 - Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using FILLIN

Unknown - 261.2 KB -

ID mapping file

Links sample ID in genotypic results file to a Germplasm ID and a testcross ID at CIMMYT

DATASET1to3.Maize.rdata

Mar 9, 2017 - A variational Bayes genomic-enabled prediction model with genotype × environment interaction

Unknown - 376.8 KB -

Phenotypic Data

Maize data

DATASET4to5.Wheat.rdata

Mar 9, 2017 - A variational Bayes genomic-enabled prediction model with genotype × environment interaction

Unknown - 459.3 KB -

Phenotypic Data

Wheat data

DATASET6.Wheat_Yield1.rdata

Mar 9, 2017 - A variational Bayes genomic-enabled prediction model with genotype × environment interaction

Unknown - 5.2 MB -

Phenotypic Data

Wheat yield data

KDSmart: Training Materials and Sample Files

Mar 2, 2017 - CIMMYT Research Data

Hearne, Sarah; Molnar, Terence; Garay, Carlos; Dreher, Kate; Ayala, Claudio, 2016, "KDSmart: Training Materials and Sample Files", https://hdl.handle.net/11529/10669, CIMMYT Research Data & Software Repository Network, V4

KDSmart is an app that can be used for data collection on any Android-based tablet or smartphone. It has many helpful features for capturing data in field and lab settings. This study contains documents and presentations that describe how KDSmart can be used and includes example...

Metasheet.pdf

Feb 28, 2017 - Survey to assess the impact of multi-level factors of change on farm trajectories in Southern Bangladesh

Adobe PDF - 103.9 KB -

Metadata

Detailed information on the data collection methodology and variables contained in datasets

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