CIMMYT Research Software

Free, open access repository of research software produced and developed by CIMMYT scientists.

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31 to 40 of 78 Results

AGD-R_v5.1_BASE_setup.exe Sep 5, 2022 - AGD-R (Analysis of Genetic Designs with R for Windows) Version 5.0 Windows Executable - 187.9 MB - MD5: 60c9619400e3b890d1136e31d0812bbb
Fieldbook2020 Aug 26, 2021 Ayala Hernández, Claudio César; Vivek, Bindiganavile; Banziger, Marianne, 2020, "Fieldbook2020", https://hdl.handle.net/11529/10548370, CIMMYT Research Data & Software Repository Network, V2 The Fieldbook2020 software provides offline capabilities for managing pedigrees, phenotypic data, seed stocks, and fieldbooks for a maize breeding program. CIMMYT is transitioning toward the use of an online Enterprise Breeding System for managing breeding information and perform...
Fieldbook2020v2.exe Aug 26, 2021 - Fieldbook2020 Windows Executable - 222.8 MB - MD5: 9d7768740adebfe5d51f0c43250fdbb1 Fieldbook2020 provides basic tools for crop evaluation and breeding. It includes an R package for statistical analyses (individual and combined). To install it save the file in your computer, then click on Fieldbook2020v2.exe file and follow the instructions.
RINDSEL-Manual-LSI-14Oct2020.pdf Oct 14, 2020 - RIndSel Selection indeces for plant breeding Adobe PDF - 1.4 MB - MD5: 606a21265ae03839be9141a3854ef371 A manual based on the book "Linear Selection Indices in Modern Plant Breeding" https://www.springer.com/gp/book/9783319912226
ViTSel - Data visualization for selection Oct 14, 2020 Dieng, Ibnou; Rodríguez, Francisco; Alvarado, Gregorio; Pacheco-Gil, Rosa Ángela; Burgueño, Juan, 2020, "ViTSel - Data visualization for selection", https://hdl.handle.net/11529/10548519, CIMMYT Research Data & Software Repository Network, V2 ViTSel is and R based software to visualize results of multi-environmental multi-trait analysis for selection in plant breeding. Given a matrix of genotype by environments in rows and traits in columns it produces several descriptive statistics and figures to explore results. It...
ViTSel_setup-14-10-2020.zip.gz Oct 14, 2020 - ViTSel - Data visualization for selection Gzip Archive - 272.9 MB - MD5: 3b7dfe0181de3fc19fc4e505abb34517
STAD-R Descriptive statistics for experimental designs May 27, 2020 Pacheco-Gil, Rosa Ángela; Rodríguez, Francisco; Alvarado, Gregorio; Vargas, Mateo; Lopez-Cruz, Marco; Crossa, Jose; Burgueño, Juan, 2017, "STAD-R Descriptive statistics for experimental designs", https://hdl.handle.net/11529/10853, CIMMYT Research Data & Software Repository Network, V5 STAD-R is a set of R programs that performs descriptive statistics, in order to make boxplots and histograms. STAD-R was designed because is necessary before than the thing, check if the dataset have the same number of repetitions, blocks, genotypes, environments, if we have miss...
STAD-R_v1.5_BASE_setup.exe May 27, 2020 - STAD-R Descriptive statistics for experimental designs Windows Executable - 255.3 MB - MD5: 9576a521aaba452334b80205baf67073
Fieldbook2020_License.pdf Feb 20, 2020 - Fieldbook2020 Adobe PDF - 85.6 KB - MD5: 46714947626bae84e4669ac2878297b9 This file contains the Legal Notice and License to use Fieldbook2020.
META-R (Multi Environment Trail Analysis with R for Windows) Version 6.04 Oct 30, 2019 Alvarado, Gregorio; López, Marco; Vargas, Mateo; Pacheco-Gil, Rosa Ángela; Rodríguez, Francisco; Burgueño, Juan; Crossa, Jose, 2015, "META-R (Multi Environment Trail Analysis with R for Windows) Version 6.04", https://hdl.handle.net/11529/10201, CIMMYT Research Data & Software Repository Network, V23 META-R is a set of R programs that performs statistical analyses to calculate BLUEs, BLUPs, genetic correlations among locations and genetic correlations between variables, broad-sense heritability, and other statistics for breeding trials are given too, in order to make boxplots...

AGD-R_v5.1_BASE_setup.exe

Sep 5, 2022 - AGD-R (Analysis of Genetic Designs with R for Windows) Version 5.0

Windows Executable - 187.9 MB -

Fieldbook2020

Aug 26, 2021

Ayala Hernández, Claudio César; Vivek, Bindiganavile; Banziger, Marianne, 2020, "Fieldbook2020", https://hdl.handle.net/11529/10548370, CIMMYT Research Data & Software Repository Network, V2

The Fieldbook2020 software provides offline capabilities for managing pedigrees, phenotypic data, seed stocks, and fieldbooks for a maize breeding program. CIMMYT is transitioning toward the use of an online Enterprise Breeding System for managing breeding information and perform...

Fieldbook2020v2.exe

Aug 26, 2021 - Fieldbook2020

Windows Executable - 222.8 MB -

Fieldbook2020 provides basic tools for crop evaluation and breeding. It includes an R package for statistical analyses (individual and combined). To install it save the file in your computer, then click on Fieldbook2020v2.exe file and follow the instructions.

RINDSEL-Manual-LSI-14Oct2020.pdf

Oct 14, 2020 - RIndSel Selection indeces for plant breeding

Adobe PDF - 1.4 MB -

A manual based on the book "Linear Selection Indices in Modern Plant Breeding" https://www.springer.com/gp/book/9783319912226

ViTSel - Data visualization for selection

Oct 14, 2020

Dieng, Ibnou; Rodríguez, Francisco; Alvarado, Gregorio; Pacheco-Gil, Rosa Ángela; Burgueño, Juan, 2020, "ViTSel - Data visualization for selection", https://hdl.handle.net/11529/10548519, CIMMYT Research Data & Software Repository Network, V2

ViTSel is and R based software to visualize results of multi-environmental multi-trait analysis for selection in plant breeding. Given a matrix of genotype by environments in rows and traits in columns it produces several descriptive statistics and figures to explore results. It...

ViTSel_setup-14-10-2020.zip.gz

Oct 14, 2020 - ViTSel - Data visualization for selection

Gzip Archive - 272.9 MB -

STAD-R Descriptive statistics for experimental designs

May 27, 2020

Pacheco-Gil, Rosa Ángela; Rodríguez, Francisco; Alvarado, Gregorio; Vargas, Mateo; Lopez-Cruz, Marco; Crossa, Jose; Burgueño, Juan, 2017, "STAD-R Descriptive statistics for experimental designs", https://hdl.handle.net/11529/10853, CIMMYT Research Data & Software Repository Network, V5

STAD-R is a set of R programs that performs descriptive statistics, in order to make boxplots and histograms. STAD-R was designed because is necessary before than the thing, check if the dataset have the same number of repetitions, blocks, genotypes, environments, if we have miss...

STAD-R_v1.5_BASE_setup.exe

May 27, 2020 - STAD-R Descriptive statistics for experimental designs

Windows Executable - 255.3 MB -

Fieldbook2020_License.pdf

Feb 20, 2020 - Fieldbook2020

Adobe PDF - 85.6 KB -

This file contains the Legal Notice and License to use Fieldbook2020.

META-R (Multi Environment Trail Analysis with R for Windows) Version 6.04

Oct 30, 2019

Alvarado, Gregorio; López, Marco; Vargas, Mateo; Pacheco-Gil, Rosa Ángela; Rodríguez, Francisco; Burgueño, Juan; Crossa, Jose, 2015, "META-R (Multi Environment Trail Analysis with R for Windows) Version 6.04", https://hdl.handle.net/11529/10201, CIMMYT Research Data & Software Repository Network, V23

META-R is a set of R programs that performs statistical analyses to calculate BLUEs, BLUPs, genetic correlations among locations and genetic correlations between variables, broad-sense heritability, and other statistics for breeding trials are given too, in order to make boxplots...

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