CIMMYT Research Data

Free, open access repository of research studies developed by CIMMYT scientists.

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8,581 to 8,590 of 10,613 Results

Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using Beagle v.4 Mar 23, 2017 Hearne, Sarah; Chen, Charles; Buckler, Edward; Mitchell, Sharon; Romero Navarro, J. Alberto; Swarts, Kelly; Li, Huihui, 2014, "Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using Beagle v.4", https://hdl.handle.net/11529/10035, CIMMYT Research Data & Software Repository Network, V3 Obtain imputed SNP profiles using Beagle v.4 from genotyping-by-sequencing of the accession parents of the SeeD GWAS testcross panel.
Mapping file - Sample ID to Germplasm ID.xlsx Mar 23, 2017 - Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using Beagle v.4 Unknown - 261.2 KB - MD5: f9a1886915ebbbec2d222f1ec0cd38f4 ID mapping file Links sample ID in genotypic results file to a Germplasm ID and a testcross ID at CIMMYT
Mapping file - Sample ID to Germplasm ID.xlsx Mar 23, 2017 - Unimputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel Unknown - 261.2 KB - MD5: f9a1886915ebbbec2d222f1ec0cd38f4 ID mapping file Links sample ID in genotypic results file to a Germplasm ID and a testcross ID at CIMMYT
Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using FILLIN Mar 23, 2017 Hearne, Sarah; Buckler, Edward; Chen, Charles; Mitchell, Sharon; Swarts, Kelly; Li, Huihui; Romero Navarro, J. Alberto, 2014, "Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using FILLIN", https://hdl.handle.net/11529/10036, CIMMYT Research Data & Software Repository Network, V3 Obtain imputed SNP profiles from genotyping-by-sequencing of the accession parents of the SeeD GWAS testcross panel.
Mapping file - Sample ID to Germplasm ID.xlsx Mar 23, 2017 - Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using FILLIN Unknown - 261.2 KB - MD5: f9a1886915ebbbec2d222f1ec0cd38f4 ID mapping file Links sample ID in genotypic results file to a Germplasm ID and a testcross ID at CIMMYT
DATASET1to3.Maize.rdata Mar 9, 2017 - A variational Bayes genomic-enabled prediction model with genotype × environment interaction Unknown - 376.8 KB - MD5: 0b0889757980aefa3f3bae20d3ecc318 Phenotypic Data Maize data
DATASET4to5.Wheat.rdata Mar 9, 2017 - A variational Bayes genomic-enabled prediction model with genotype × environment interaction Unknown - 459.3 KB - MD5: c59905b897fe95f9d600f78cd42b4fba Phenotypic Data Wheat data
DATASET6.Wheat_Yield1.rdata Mar 9, 2017 - A variational Bayes genomic-enabled prediction model with genotype × environment interaction Unknown - 5.2 MB - MD5: 4a3ec390c48988b3203c50904a8b78da Phenotypic Data Wheat yield data
KDSmart: Training Materials and Sample Files Mar 2, 2017 Hearne, Sarah; Molnar, Terence; Garay, Carlos; Dreher, Kate; Ayala, Claudio, 2016, "KDSmart: Training Materials and Sample Files", https://hdl.handle.net/11529/10669, CIMMYT Research Data & Software Repository Network, V4 KDSmart is an app that can be used for data collection on any Android-based tablet or smartphone. It has many helpful features for capturing data in field and lab settings. This study contains documents and presentations that describe how KDSmart can be used and includes example...
Genomic-enabled prediction in maize using kernel models with genotype × environment interaction Feb 16, 2017 Bandeira e Sousa, Massaine; Cuevas, Jaime; Oliveira Couto, Evellyn Giselly de; Pérez-Rodríguez, Paulino; Jarquín, Diego; Fritsche-Neto, Roberto; Burgueño, Juan; Crossa, Jose, 2017, "Genomic-enabled prediction in maize using kernel models with genotype × environment interaction", https://hdl.handle.net/11529/10887, CIMMYT Research Data & Software Repository Network, V1 ^^

Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using Beagle v.4

Mar 23, 2017

Hearne, Sarah; Chen, Charles; Buckler, Edward; Mitchell, Sharon; Romero Navarro, J. Alberto; Swarts, Kelly; Li, Huihui, 2014, "Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using Beagle v.4", https://hdl.handle.net/11529/10035, CIMMYT Research Data & Software Repository Network, V3

Obtain imputed SNP profiles using Beagle v.4 from genotyping-by-sequencing of the accession parents of the SeeD GWAS testcross panel.

Mapping file - Sample ID to Germplasm ID.xlsx

Mar 23, 2017 - Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using Beagle v.4

Unknown - 261.2 KB -

ID mapping file

Links sample ID in genotypic results file to a Germplasm ID and a testcross ID at CIMMYT

Mapping file - Sample ID to Germplasm ID.xlsx

Mar 23, 2017 - Unimputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel

Unknown - 261.2 KB -

ID mapping file

Links sample ID in genotypic results file to a Germplasm ID and a testcross ID at CIMMYT

Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using FILLIN

Mar 23, 2017

Hearne, Sarah; Buckler, Edward; Chen, Charles; Mitchell, Sharon; Swarts, Kelly; Li, Huihui; Romero Navarro, J. Alberto, 2014, "Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using FILLIN", https://hdl.handle.net/11529/10036, CIMMYT Research Data & Software Repository Network, V3

Obtain imputed SNP profiles from genotyping-by-sequencing of the accession parents of the SeeD GWAS testcross panel.

Mapping file - Sample ID to Germplasm ID.xlsx

Mar 23, 2017 - Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using FILLIN

Unknown - 261.2 KB -

ID mapping file

Links sample ID in genotypic results file to a Germplasm ID and a testcross ID at CIMMYT

DATASET1to3.Maize.rdata

Mar 9, 2017 - A variational Bayes genomic-enabled prediction model with genotype × environment interaction

Unknown - 376.8 KB -

Phenotypic Data

Maize data

DATASET4to5.Wheat.rdata

Mar 9, 2017 - A variational Bayes genomic-enabled prediction model with genotype × environment interaction

Unknown - 459.3 KB -

Phenotypic Data

Wheat data

DATASET6.Wheat_Yield1.rdata

Mar 9, 2017 - A variational Bayes genomic-enabled prediction model with genotype × environment interaction

Unknown - 5.2 MB -

Phenotypic Data

Wheat yield data

KDSmart: Training Materials and Sample Files

Mar 2, 2017

Hearne, Sarah; Molnar, Terence; Garay, Carlos; Dreher, Kate; Ayala, Claudio, 2016, "KDSmart: Training Materials and Sample Files", https://hdl.handle.net/11529/10669, CIMMYT Research Data & Software Repository Network, V4

KDSmart is an app that can be used for data collection on any Android-based tablet or smartphone. It has many helpful features for capturing data in field and lab settings. This study contains documents and presentations that describe how KDSmart can be used and includes example...

Genomic-enabled prediction in maize using kernel models with genotype × environment interaction

Feb 16, 2017

Bandeira e Sousa, Massaine; Cuevas, Jaime; Oliveira Couto, Evellyn Giselly de; Pérez-Rodríguez, Paulino; Jarquín, Diego; Fritsche-Neto, Roberto; Burgueño, Juan; Crossa, Jose, 2017, "Genomic-enabled prediction in maize using kernel models with genotype × environment interaction", https://hdl.handle.net/11529/10887, CIMMYT Research Data & Software Repository Network, V1

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