CIMMYT Research Data

Free, open access repository of research studies developed by CIMMYT scientists.

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8,471 to 8,480 of 10,510 Results

Altas_Molecular_Lista_de_videos_y_hipervinculo.txt Mar 31, 2017 - Taller: "Aprovechamiento De Los Atlas Moleculares De Maíz Y Trigo." Diciembre 2015 Plain Text - 121 B - MD5: 8795cf50d062133a86c8afa181b948cf 6. Presentaciónes del Curso en Video
Significant SNPs from SeeD GWAS Analysis of Flowering Time Mar 24, 2017 Romero Navarro, J. Alberto; Willcox, Martha; Burgueño, Juan; Romay, Cinta; Swarts, Kelly; Trachsel, Samuel; Preciado, Ernesto; Terron, Arturo; Vallejo Delgado, Humberto; Vidal, Victor; Ortega, Alejandro; Espinoza Banda, Armando; Gómez Montiel, Noel Orlando; Ortíz-Monasterio Rosas, José Ivan; San Vicente, Felix; Guadarrama Espinoza, Armando; Atlin, Gary; Wenzl, Peter; Hearne, Sarah; Buckler, Ed, 2017, "Significant SNPs from SeeD GWAS Analysis of Flowering Time", https://hdl.handle.net/11529/10906, CIMMYT Research Data & Software Repository Network, V1 The files included in this study provide significant SNPs from the gene-level analysis for days to anthesis, days to silking, altitude, and latitude within the SeeD GWAS panel. Markers shown are only those found outside high LD regions as defined in the paper: A study of allelic...
HighLDranges.txt Mar 24, 2017 - Significant SNPs from SeeD GWAS Analysis of Flowering Time Plain Text - 2.7 KB - MD5: 544a18cae5b6e12e468db11d25b8dc48
topAltSNPs_outsideHighLD.txt Mar 24, 2017 - Significant SNPs from SeeD GWAS Analysis of Flowering Time Plain Text - 34.1 KB - MD5: eedc41e20b329474713f56cd5b482c53
topDA_outsideHighLD.df.txt Mar 24, 2017 - Significant SNPs from SeeD GWAS Analysis of Flowering Time Plain Text - 122.8 KB - MD5: 6d5e1e00cd6e27deae4dbd08e67485d7
topDS_outsideHighLD.df.txt Mar 24, 2017 - Significant SNPs from SeeD GWAS Analysis of Flowering Time Plain Text - 121.6 KB - MD5: b194cb2252d095e80afa39e03ab975f6
topLatSNPs_outsideHighLD.txt Mar 24, 2017 - Significant SNPs from SeeD GWAS Analysis of Flowering Time Plain Text - 34.1 KB - MD5: eedc41e20b329474713f56cd5b482c53
Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using Beagle v.4 Mar 23, 2017 Hearne, Sarah; Chen, Charles; Buckler, Edward; Mitchell, Sharon; Romero Navarro, J. Alberto; Swarts, Kelly; Li, Huihui, 2014, "Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using Beagle v.4", https://hdl.handle.net/11529/10035, CIMMYT Research Data & Software Repository Network, V3 Obtain imputed SNP profiles using Beagle v.4 from genotyping-by-sequencing of the accession parents of the SeeD GWAS testcross panel.
Mapping file - Sample ID to Germplasm ID.xlsx Mar 23, 2017 - Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using Beagle v.4 Unknown - 261.2 KB - MD5: f9a1886915ebbbec2d222f1ec0cd38f4 ID mapping file Links sample ID in genotypic results file to a Germplasm ID and a testcross ID at CIMMYT
Mapping file - Sample ID to Germplasm ID.xlsx Mar 23, 2017 - Unimputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel Unknown - 261.2 KB - MD5: f9a1886915ebbbec2d222f1ec0cd38f4 ID mapping file Links sample ID in genotypic results file to a Germplasm ID and a testcross ID at CIMMYT

Altas_Molecular_Lista_de_videos_y_hipervinculo.txt

Mar 31, 2017 - Taller: "Aprovechamiento De Los Atlas Moleculares De Maíz Y Trigo." Diciembre 2015

Plain Text - 121 B -

6. Presentaciónes del Curso en Video

Significant SNPs from SeeD GWAS Analysis of Flowering Time

Mar 24, 2017

Romero Navarro, J. Alberto; Willcox, Martha; Burgueño, Juan; Romay, Cinta; Swarts, Kelly; Trachsel, Samuel; Preciado, Ernesto; Terron, Arturo; Vallejo Delgado, Humberto; Vidal, Victor; Ortega, Alejandro; Espinoza Banda, Armando; Gómez Montiel, Noel Orlando; Ortíz-Monasterio Rosas, José Ivan; San Vicente, Felix; Guadarrama Espinoza, Armando; Atlin, Gary; Wenzl, Peter; Hearne, Sarah; Buckler, Ed, 2017, "Significant SNPs from SeeD GWAS Analysis of Flowering Time", https://hdl.handle.net/11529/10906, CIMMYT Research Data & Software Repository Network, V1

The files included in this study provide significant SNPs from the gene-level analysis for days to anthesis, days to silking, altitude, and latitude within the SeeD GWAS panel. Markers shown are only those found outside high LD regions as defined in the paper: A study of allelic...

HighLDranges.txt

Mar 24, 2017 - Significant SNPs from SeeD GWAS Analysis of Flowering Time

Plain Text - 2.7 KB -

topAltSNPs_outsideHighLD.txt

Mar 24, 2017 - Significant SNPs from SeeD GWAS Analysis of Flowering Time

Plain Text - 34.1 KB -

topDA_outsideHighLD.df.txt

Mar 24, 2017 - Significant SNPs from SeeD GWAS Analysis of Flowering Time

Plain Text - 122.8 KB -

topDS_outsideHighLD.df.txt

Mar 24, 2017 - Significant SNPs from SeeD GWAS Analysis of Flowering Time

Plain Text - 121.6 KB -

topLatSNPs_outsideHighLD.txt

Mar 24, 2017 - Significant SNPs from SeeD GWAS Analysis of Flowering Time

Plain Text - 34.1 KB -

Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using Beagle v.4

Mar 23, 2017

Hearne, Sarah; Chen, Charles; Buckler, Edward; Mitchell, Sharon; Romero Navarro, J. Alberto; Swarts, Kelly; Li, Huihui, 2014, "Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using Beagle v.4", https://hdl.handle.net/11529/10035, CIMMYT Research Data & Software Repository Network, V3

Obtain imputed SNP profiles using Beagle v.4 from genotyping-by-sequencing of the accession parents of the SeeD GWAS testcross panel.

Mapping file - Sample ID to Germplasm ID.xlsx

Mar 23, 2017 - Imputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel: Imputation using Beagle v.4

Unknown - 261.2 KB -

ID mapping file

Links sample ID in genotypic results file to a Germplasm ID and a testcross ID at CIMMYT

Mapping file - Sample ID to Germplasm ID.xlsx

Mar 23, 2017 - Unimputed GbS derived SNPs for maize landrace accessions represented in the SeeD-maize GWAS panel

Unknown - 261.2 KB -

ID mapping file

Links sample ID in genotypic results file to a Germplasm ID and a testcross ID at CIMMYT

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