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1,351 to 1,360 of 1,516 Results
DArTSeq_wheat_genotyping_protocol.pdf
Jul 24, 2016 - DArTseq-derived SNPs for wheat Mexican landrace accessions
Adobe PDF - 188.5 KB - MD5: 39588041c9433250f9d59f96ad81feaa
Protocol
DNA extraction protocol_for_genotyping_CIMMYT.pdf
Jul 24, 2016 - DArTseq-derived SNPs for wheat Mexican landrace accessions
Adobe PDF - 85.1 KB - MD5: 78cfd5d827195a021845bd676223fecc
Protocol
Protocol used for DNA extraction prior to genotyping
SampleIDvsGID_mexican_landrace.txt
Jul 24, 2016 - DArTseq-derived SNPs for wheat Mexican landrace accessions
Plain Text - 172.4 KB - MD5: b2a0c055fb5b7ded69b1401181a2ac96
Mapping file
This file can be used to map between the DNA Sample ID used to identify samples in the DArTSeq genotypic results files and the GID (Germplasm ID) that is used to identify CIMMYT germplasm.
DArTSeq_102474markers_FJ_Uchrom.txt
Jul 24, 2016 - Seeds of Discovery - MasAgro Biodiversidad Wheat DArTseq-Derived SNP Data: Beta Recall Results From 2011-2014
Plain Text - 2.8 MB - MD5: 870316291d67f39e74b39bc693e46cad
Genotypic data
Map file that can be used to visualize genotypic results in Flapjack. Please note that all markers are unmapped and their order does not reflect their actual relative positions in the wheat genome.
DArTSeq_SNPs_45610samples_102474markers.csv.zip
Jul 24, 2016 - Seeds of Discovery - MasAgro Biodiversidad Wheat DArTseq-Derived SNP Data: Beta Recall Results From 2011-2014
Unknown - 608.7 MB - MD5: 335b4a2286f097b23021e011060d5772
Genotypic data
DArtSeq SNP call data in a csv file that includes several quality parameters for the genotypic results.
DArTSeq_SNPs_45610samples_102474markers.FJ_project.zip
Jul 24, 2016 - Seeds of Discovery - MasAgro Biodiversidad Wheat DArTseq-Derived SNP Data: Beta Recall Results From 2011-2014
Unknown - 1.7 GB - MD5: 09d279adc70dfd2d953ffe92c0b520d4
Genotypic data
DArtSeq SNP call data stored in a Flapjack project format to allow immediate upload to the Flapjack software for visualization and analysis
DArTSeq_SNPs_45610samples_102474markers.FJ.txt.zip
Jul 24, 2016 - Seeds of Discovery - MasAgro Biodiversidad Wheat DArTseq-Derived SNP Data: Beta Recall Results From 2011-2014
Unknown - 596.3 MB - MD5: 91e690cb820ff467c1fe73832c5882f4
Genotypic data
DArtSeq SNP call data in a tab-delimited text file. This can be used for uploading to Flapjack in conjunction with the map file. Please note that this matrix is inverted from the normal Flapjack format so the appropriate parameter must be changed in the Flapjack import tool.
DArTSeq_SNPs_report_data_dictionary.txt
Jul 24, 2016 - Seeds of Discovery - MasAgro Biodiversidad Wheat DArTseq-Derived SNP Data: Beta Recall Results From 2011-2014
Plain Text - 2.2 KB - MD5: 945162b58c7b76b74b42e69cd70c8896
Data dictionary
A description of the columns of information and header row information present in the DArTSeq SNPs csv genotypic results file.
DArTSeq_wheat_genotyping_protocol.pdf
Jul 24, 2016 - Seeds of Discovery - MasAgro Biodiversidad Wheat DArTseq-Derived SNP Data: Beta Recall Results From 2011-2014
Adobe PDF - 188.5 KB - MD5: 39588041c9433250f9d59f96ad81feaa
Protocol
DNA extraction protocol_for_genotyping_CIMMYT.pdf
Jul 24, 2016 - Seeds of Discovery - MasAgro Biodiversidad Wheat DArTseq-Derived SNP Data: Beta Recall Results From 2011-2014
Adobe PDF - 85.1 KB - MD5: 78cfd5d827195a021845bd676223fecc
Protocol
Protocol used for DNA extraction prior to genotyping
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