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1,341 to 1,350 of 1,516 Results
DArTSeq_SNPs_iranian_landrace_2440samples_102474markers_FJ_project.zip
Jul 24, 2016 - DArTseq-derived SNPs for wheat Iranian landrace accessions
Unknown - 94.2 MB - MD5: 5fe45af05161e23182a807ef7abb58b7
Genotypic data
DArtSeq SNP call data stored in a Flapjack project format to allow immediate upload to the Flapjack software for visualization and analysis
DArTSeq_SNPs_iranian_landrace_2440samples_102474markers_FJ.txt.zip
Jul 24, 2016 - DArTseq-derived SNPs for wheat Iranian landrace accessions
Unknown - 38.1 MB - MD5: 4fd41e28e678bf79ec2a73d4385be815
Genotypic data
DArtSeq SNP call data in a tab-delimited text file. This can be used for uploading to Flapjack in conjunction with the map file. Please note that this matrix is inverted from the normal Flapjack format so the appropriate parameter must be changed in the Flapjack import tool.
DArTSeq_wheat_genotyping_protocol.pdf
Jul 24, 2016 - DArTseq-derived SNPs for wheat Iranian landrace accessions
Adobe PDF - 188.5 KB - MD5: 39588041c9433250f9d59f96ad81feaa
Protocol
DNA extraction protocol_for genotyping_CIMMYT.pdf
Jul 24, 2016 - DArTseq-derived SNPs for wheat Iranian landrace accessions
Adobe PDF - 85.1 KB - MD5: 78cfd5d827195a021845bd676223fecc
Protocol
Protocol used for DNA extraction prior to genotyping
SampleIDvsGID_iranian_landrace.txt
Jul 24, 2016 - DArTseq-derived SNPs for wheat Iranian landrace accessions
Plain Text - 48.9 KB - MD5: d811c272394385a56b181e9571c4da92
Mapping file
This file can be used to map between the DNA Sample ID used to identify samples in the DArTSeq genotypic results files and the GID (Germplasm ID) that is used to identify CIMMYT germplasm.
DArTSeq_102474markers_FJ_Uchrom.txt
Jul 24, 2016 - DArTseq-derived SNPs for wheat Mexican landrace accessions
Plain Text - 2.8 MB - MD5: 870316291d67f39e74b39bc693e46cad
Genotypic data
Map file that can be used to visualize genotypic results in Flapjack. Please note that all markers are unmapped and their order does not reflect their actual relative positions in the wheat genome.
DArTSeq_genotypic_report_data_dictionary.txt
Jul 24, 2016 - DArTseq-derived SNPs for wheat Mexican landrace accessions
Plain Text - 2.2 KB - MD5: 945162b58c7b76b74b42e69cd70c8896
Data dictionary
A description of the columns of information and header row information present in the DArTSeq SNPs csv genotypic results file.
DArTSeq_SNPs_mexican_landrace_8584samples_102474markers.csv.zip
Jul 24, 2016 - DArTseq-derived SNPs for wheat Mexican landrace accessions
Unknown - 123.9 MB - MD5: 52151d4cf44ea11297bde9c0b5ec10ba
Genotypic data
DArtSeq SNP call data in a csv file that includes several quality parameters for the genotypic results
DArTSeq_SNPs_mexican_landrace_8584samples_102474markers.FJ_project.zip
Jul 24, 2016 - DArTseq-derived SNPs for wheat Mexican landrace accessions
Unknown - 331.0 MB - MD5: e21ddb2d08b0e24508f9cd23295b03a7
Genotypic data
DArtSeq SNP call data stored in a Flapjack project format to allow immediate upload to the Flapjack software for visualization and analysis
DArTSeq_SNPs_mexican_landrace_8584samples_102474markers.FJ.txt.zip
Jul 24, 2016 - DArTseq-derived SNPs for wheat Mexican landrace accessions
Unknown - 116.2 MB - MD5: ee06d8761b97f46f46e12192268b036c
Genotypic data
DArtSeq SNP call data in a tab-delimited text file. This can be used for uploading to Flapjack in conjunction with the map file. Please note that this matrix is inverted from the normal Flapjack format so the appropriate parameter must be changed in the Flapjack import tool.
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