International Wheat Yield Partnership Research Data

Free, open access repository of research data produced as part of the International Wheat Yield Partnership (IWYP).

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61 to 70 of 126 Results

HCB17_SNPs_Unfiltered.recode.vcf Oct 3, 2018 - Discovery of variants in the parental lines grown in the hybrid crossing block using genotyping-by-sequencing Virtual Contact File - 734.8 MB - MD5: 8333b52c7e4d0f2ff4236e238f756203 SNP Calls. To request access to this file or any information related to it, please contact the IWYP Data Coordintor or Stephen Baezinger (pstephen.baenziger@gmail.com).
HCB17_Variants_Unfiltered.recode.vcf Oct 3, 2018 - Discovery of variants in the parental lines grown in the hybrid crossing block using genotyping-by-sequencing Virtual Contact File - 751.9 MB - MD5: 502d9643d0f4ff83ecf612312489aca5 Variant Calls. To request access to this file or any information related to it, please contact the IWYP Data Coordintor or Stephen Baezinger (pstephen.baenziger@gmail.com).
Links to FASTQ files.txt Oct 3, 2018 - Discovery of variants in the parental lines grown in the hybrid crossing block using genotyping-by-sequencing Plain Text - 521 B - MD5: 74188e20b9df5cd003b57c59f6be3d41 Temporary links to three FASTQ files with GBS data for the parental samples, stored in the University of Nebraska-Lincoln Box. To request access to these links, please contact the IWYP Data Coordinator or send a request email directly to Stephen Baenziger (pstephen.baenziger@gmai...
Replication Data for: Hidden variation in polyploid wheat drives local adaptation Apr 16, 2018 Gardiner, Laura-Jayne; Joynson, Ryan; Omony, Jimmy; Rusholme-Pilcher, Rachel; Olohan, Lisa; Lang, Daniel; Bai, Caihong; Hawkesford, Malcolm; Salt, David; Spannagl, Manuel; Mayer, Klaus; Kenny, John; Bevan, Michael; Hall, Neil; Hall, Anthony, 2018, "Replication Data for: Hidden variation in polyploid wheat drives local adaptation", https://hdl.handle.net/11529/10548000, CIMMYT Research Data & Software Repository Network, V1 This dataset contains a link to data hosted in the Grass Roots Data Repository, in relation to the Genome Research journal article 'Hidden variation in polyploid wheat drives local adaptation' (Volume 28, pages 1319-13328) with DOI: 10.1101/gr.233551.117.
Infrastructure, Germplasm Resources, and Services for the International Wheat Yield Partnership Hub (IWYP Hub) at CIMMYT Mar 13, 2018 Gimeno, Jacinta; Reynolds, Matthew, 2017, "Infrastructure, Germplasm Resources, and Services for the International Wheat Yield Partnership Hub (IWYP Hub) at CIMMYT", https://hdl.handle.net/11529/10909, CIMMYT Research Data & Software Repository Network, V3 The IWYP Hub based in Ciudad Obregon, Mexico, offers an array of services, technology, and germplasm resources to IWYP Partner and Aligned projects. This study provides general information about the Hub, as well as descriptions of several germplasm populations being utilized with...
Phenotyping protocols used at Wheat Physiology, CIMMYT Nov 3, 2017 Reynolds, Matthew; Pask, Alistair; Mullan, Debra; Pietragalla, Julian, 2017, "Phenotyping protocols used at Wheat Physiology, CIMMYT", https://hdl.handle.net/11529/11105, CIMMYT Research Data & Software Repository Network, V2 This study includes two manuals that describe the use of diverse phenotyping techniques for applied crop research, with an emphasis on the methods commonly used at the International Maize and Wheat Improvement Center (CIMMYT). Volume 1 (Interdisciplinary Approaches to Improve Cro...
Climatic data reported during the wheat cycle in Obregon (IWYP Hub) in 2015-2016 and 2016-2017 Nov 3, 2017 Molero, Gemma; Sonder, Kai, 2017, "Climatic data reported during the wheat cycle in Obregon (IWYP Hub) in 2015-2016 and 2016-2017", https://hdl.handle.net/11529/11107, CIMMYT Research Data & Software Repository Network, V2 Climatic data reported during the wheat cycle in Obregon (IWYP Hub) in 2015-2016 and 2016-2017. Variables reported: average, maximum and minimum daily temperature (°C), precipitation (mm/day), daily relative humidity (%), evapotranspiration (mm/day) and average solar radiation pe...
Germplasm list.xlsx Oct 16, 2017 - Populations Axiom SNPs Data - John Innes Centre Unknown - 80.1 KB - MD5: 0b81717e5458320577462b5c09f37be7 Germplasm and markers The list of germplasm with pedigree information for the 15 populations used in the study
PARxBAJ.hdf5 Oct 16, 2017 - Populations Axiom SNPs Data - John Innes Centre Unknown - 1.2 MB - MD5: 67500a9f041405058b62f56e8c208277 ParagonxBAJ Converted data to HDF5 format for the Germinate Wheat Database
PARxBAJ_pop_axiom_SNP.xlsx Oct 16, 2017 - Populations Axiom SNPs Data - John Innes Centre Unknown - 2.5 MB - MD5: 6797e54821b82cdfec48d43ef5a29aa8 ParagonxBAJ 2-letter nucleotide SNPs call original matrix

HCB17_SNPs_Unfiltered.recode.vcf

Oct 3, 2018 - Discovery of variants in the parental lines grown in the hybrid crossing block using genotyping-by-sequencing

Virtual Contact File - 734.8 MB -

SNP Calls. To request access to this file or any information related to it, please contact the IWYP Data Coordintor or Stephen Baezinger (pstephen.baenziger@gmail.com).

HCB17_Variants_Unfiltered.recode.vcf

Oct 3, 2018 - Discovery of variants in the parental lines grown in the hybrid crossing block using genotyping-by-sequencing

Virtual Contact File - 751.9 MB -

Variant Calls. To request access to this file or any information related to it, please contact the IWYP Data Coordintor or Stephen Baezinger (pstephen.baenziger@gmail.com).

Links to FASTQ files.txt

Oct 3, 2018 - Discovery of variants in the parental lines grown in the hybrid crossing block using genotyping-by-sequencing

Plain Text - 521 B -

Temporary links to three FASTQ files with GBS data for the parental samples, stored in the University of Nebraska-Lincoln Box. To request access to these links, please contact the IWYP Data Coordinator or send a request email directly to Stephen Baenziger (pstephen.baenziger@gmai...

Replication Data for: Hidden variation in polyploid wheat drives local adaptation

Apr 16, 2018

Gardiner, Laura-Jayne; Joynson, Ryan; Omony, Jimmy; Rusholme-Pilcher, Rachel; Olohan, Lisa; Lang, Daniel; Bai, Caihong; Hawkesford, Malcolm; Salt, David; Spannagl, Manuel; Mayer, Klaus; Kenny, John; Bevan, Michael; Hall, Neil; Hall, Anthony, 2018, "Replication Data for: Hidden variation in polyploid wheat drives local adaptation", https://hdl.handle.net/11529/10548000, CIMMYT Research Data & Software Repository Network, V1

This dataset contains a link to data hosted in the Grass Roots Data Repository, in relation to the Genome Research journal article 'Hidden variation in polyploid wheat drives local adaptation' (Volume 28, pages 1319-13328) with DOI: 10.1101/gr.233551.117.

Infrastructure, Germplasm Resources, and Services for the International Wheat Yield Partnership Hub (IWYP Hub) at CIMMYT

Mar 13, 2018

Gimeno, Jacinta; Reynolds, Matthew, 2017, "Infrastructure, Germplasm Resources, and Services for the International Wheat Yield Partnership Hub (IWYP Hub) at CIMMYT", https://hdl.handle.net/11529/10909, CIMMYT Research Data & Software Repository Network, V3

The IWYP Hub based in Ciudad Obregon, Mexico, offers an array of services, technology, and germplasm resources to IWYP Partner and Aligned projects. This study provides general information about the Hub, as well as descriptions of several germplasm populations being utilized with...

Phenotyping protocols used at Wheat Physiology, CIMMYT

Nov 3, 2017

Reynolds, Matthew; Pask, Alistair; Mullan, Debra; Pietragalla, Julian, 2017, "Phenotyping protocols used at Wheat Physiology, CIMMYT", https://hdl.handle.net/11529/11105, CIMMYT Research Data & Software Repository Network, V2

This study includes two manuals that describe the use of diverse phenotyping techniques for applied crop research, with an emphasis on the methods commonly used at the International Maize and Wheat Improvement Center (CIMMYT). Volume 1 (Interdisciplinary Approaches to Improve Cro...

Climatic data reported during the wheat cycle in Obregon (IWYP Hub) in 2015-2016 and 2016-2017

Nov 3, 2017

Molero, Gemma; Sonder, Kai, 2017, "Climatic data reported during the wheat cycle in Obregon (IWYP Hub) in 2015-2016 and 2016-2017", https://hdl.handle.net/11529/11107, CIMMYT Research Data & Software Repository Network, V2

Climatic data reported during the wheat cycle in Obregon (IWYP Hub) in 2015-2016 and 2016-2017. Variables reported: average, maximum and minimum daily temperature (°C), precipitation (mm/day), daily relative humidity (%), evapotranspiration (mm/day) and average solar radiation pe...

Germplasm list.xlsx

Oct 16, 2017 - Populations Axiom SNPs Data - John Innes Centre

Unknown - 80.1 KB -

Germplasm and markers

The list of germplasm with pedigree information for the 15 populations used in the study

PARxBAJ.hdf5

Oct 16, 2017 - Populations Axiom SNPs Data - John Innes Centre

Unknown - 1.2 MB -

ParagonxBAJ

Converted data to HDF5 format for the Germinate Wheat Database

PARxBAJ_pop_axiom_SNP.xlsx

Oct 16, 2017 - Populations Axiom SNPs Data - John Innes Centre

Unknown - 2.5 MB -

ParagonxBAJ

2-letter nucleotide SNPs call original matrix

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